Cross-linking mass spectrometry data analysis with XlinkX embedded in Proteome Discoverer - Richard Scheltema
Requirements: Own laptop recommended but not required.
xi: Crosslinking Mass-Spectrometry with xi - Going from Raw-Files to Confident Identifications - Lutz Fischer
Requirements: Windows laptop is recommended.
xiVIEW: xiVIEW: Interactive visualisation and exploration of crosslinking data - Martin Graham
Requirements: A computer with a modem HTML5-compatible browser is necessary, Chrome is recommended.
MeroX 2.0 - MS/MS-cleavable protein-protein XL-MS data analysis - Michael Götze, Claudio Iacobucci & Andrea Sinz
Requirements: Please bring a laptop that has Java installed.
Optimal use of MS cross-linking data in modelling biomolecular complexes by combining DISVIS and HADDOCK - Jörg Schaarschmidt
HDX-MS: what is it and what can it do for you? - Kasper D. Rand
Requirements: Bring your questions for Q/A session.
Xlink Analyzer: software for integrative analysis of cross-links and other restraints in the context of three-dimensional structures - Karol Kaszuba
For the tutorials, please install the USCF Chimera and the Xlink Analyzer plugin beforehand following the instructions at:
Xlink Analyzer is available for download at:
RNPxl: Identifying peptide-nucleic acid cross-links using the OpenMS tool RNPxl - Timo Sachsenberg & Alexander Wulf
(This workshop is partially supported by de.NBI)